SOM cluster: 1794

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 596
Promoter: 0%
CpG-Island: 0%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 21/100 | e-val: 0.0000035
Factore-val(match)DB
Foxd30.00048886JASPAR
Foxq10.0050278JASPAR
SRY0.010871JASPAR
NFATC20.011407JASPAR
Pou5f10.011564JASPAR

BED file downloads

Download top of 596 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 180546620-180546770OVAAL39.74
chr3: 29355620-29355770RPS12P540.83
chr1: 26012860-26013010RP1-187B23.153.01
chr1: 26012860-26013010MAN1C153.01
chr9: 125189100-125189250PTGS160.97
chrX: 65904220-65904370EDA2R67.27
chr11: 125115340-125115490PKNOX269.87
chr4: 24780620-24780770SOD370.46
chr16: 4107640-4107790ADCY971.22
chr6: 119491700-119491850MAN1A171.23
View top connections.

Other

CodePlot