SOM cluster: 1790

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 335
Promoter: 4%
CpG-Island: 0%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 35/100 | e-val: 0.011
Factore-val(match)DB
Foxd30.000000095448JASPAR
Foxq10.0000010789JASPAR
MEF2A0.000029107JASPAR
FOXI10.00059853JASPAR
HNF1B0.0010283JASPAR

BED file downloads

Download top of 335 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 8241780-8241930SGK22339.76
chr13: 45902760-45902910GTF2F247.52
chr13: 45902760-45902910SNORA3147.52
chr8: 42956980-42957130RNU1-124P52.63
chr5: 148801605-148801755AC131025.856.75
chr5: 148801605-148801755MIR143HG56.75
chr22: 20907340-20907490KLHL2258.29
chr8: 118990965-118991115EXT162.38
chr13: 31538025-31538175TEX26-AS163.65
chr5: 149679160-149679310CAMK2A67.42
View top connections.

Other

CodePlot