SOM cluster: 1788

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 215
Promoter: 1%
CpG-Island: 0%
Conserved: 49%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 33/100 | e-val: 0.0000096
Factore-val(match)DB
Foxa20.0000019667JASPAR
FOXA10.0000025095JASPAR
Foxq10.000016602JASPAR
FOXI10.000040682JASPAR
FOXO30.000077541JASPAR
Sites: 25/100 | e-val: 0.00000012
Factore-val(match)DB
Myf0.0000082627JASPAR
TAL1::TCF30.00019583JASPAR
FOXA10.0020588JASPAR
NHLH10.0063472JASPAR
Foxd30.0097206JASPAR
Sites: 12/100 | e-val: 1.6
Factore-val(match)DB
HNF1B0.00000085573JASPAR
FOXO30.00016822JASPAR
FOXD10.00056606JASPAR
Evi10.0016483JASPAR
Foxq10.0022298JASPAR
Sites: 19/100 | e-val: 0.61
Factore-val(match)DB
Pou5f10.002377JASPAR
NR3C10.0055385JASPAR
SRY0.0070235JASPAR
Sox50.0138JASPAR
NFATC20.018085JASPAR

BED file downloads

Download top of 215 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 180082220-180082370QSOX131.82
chr8: 121835860-121836010SNTB158.74
chr2: 66805540-66805690MEIS161.63
chr22: 33113960-33114110TIMP366.16
chr11: 130290820-130290970ADAMTS870.87
chr13: 94553100-94553250GPC671.34
chr11: 103872320-103872470PDGFD75.99
chr6: 134135520-134135670TCF2179.7
chr9: 113796580-113796730Y_RNA80.96
chr14: 52779620-52779770PTGER282.91
View top connections.

Other

CodePlot