SOM cluster: 1777

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 6756
Promoter: 0%
CpG-Island: 0%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 0.00000000000012
Factore-val(match)DB
HNF1A0.00096151JASPAR
HNF1B0.0010618JASPAR
MEF2A0.0019256JASPAR
Foxq10.002526JASPAR
Prrx20.012204JASPAR

BED file downloads

Download top of 6756 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92311480-92311630TGFBR313.64
chr2: 75847465-75847615MRPL1925.23
chr8: 10571400-10571550SOX726.95
chr12: 9949800-9949950CLEC2B36.34
chr9: 130486225-130486375RP11-228B15.436.54
chr9: 130486225-130486375CDK936.54
chr12: 93293805-93293955EEA139.46
chr12: 33059440-33059590RP11-267D19.239.72
chr12: 120620020-120620170RPS20P3141.72
chr2: 136707380-136707530AC011999.142.14
View top connections.

Other

CodePlot