SOM cluster: 1765

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 150
Promoter: 4%
CpG-Island: 0%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 49/100 | e-val: 1.5e-36
Factore-val(match)DB
SOX100.0000024923JASPAR
SOX90.000044354JASPAR
Sox20.0028816JASPAR
Sox50.014462JASPAR
SRY0.018491JASPAR

BED file downloads

Download top of 150 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 79692600-79692750ZC2HC1A41.83
chr4: 170877740-170877890MFAP3L54.03
chr4: 170877740-170877890RP11-205M3.354.03
chr10: 97211745-97211895SORBS156.82
chr11: 126264680-126264830ST3GAL457.58
chr11: 112148720-112148870PTS66.49
chr22: 28567240-28567390TTC2874.35
chr5: 112539240-112539390MCC82.75
chr3: 118706460-118706610IGSF11-AS183.7
chr3: 118706460-118706610IGSF1183.7
View top connections.

Other

CodePlot