SOM cluster: 1763

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1795
Promoter: 0%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 68/100 | e-val: 0
Factore-val(match)DB
SOX100.000026373JASPAR
SOX90.00062331JASPAR
Sox170.010097JASPAR
Sox50.033056JASPAR
Sox20.042765JASPAR
Sites: 25/100 | e-val: 0.4
Factore-val(match)DB
Foxd30.000023578JASPAR
NFATC20.0015074JASPAR
Foxq10.0032935JASPAR
FOXI10.006935JASPAR
ARID3A0.013661JASPAR

BED file downloads

Download top of 1795 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 116005460-116005610SEMA6A34.03
chr7: 112638020-112638170C7orf6042.52
chr1: 179891185-179891335IFRG1545.68
chr1: 179891185-179891335RP11-52I18.145.68
chr3: 37296940-37297090AC097359.247.27
chr1: 168206145-168206295SFT2D249.19
chr1: 168206145-168206295ANKRD36BP149.19
chr6: 18468785-18468935snoU1350.07
chr12: 83232000-83232150TMTC250.08
chrX: 70442925-70443075GJB154.33
View top connections.

Other

CodePlot