SOM cluster: 1755

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 13056
Promoter: 3%
CpG-Island: 1%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 30/100 | e-val: 0.048
Factore-val(match)DB
SP10.0000000000011177JASPAR
RREB10.0000000026585JASPAR
Pax40.00000066599JASPAR
PLAG10.0028499JASPAR
Egr10.0088083JASPAR

BED file downloads

Download top of 13056 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 38761200-38761350CCR725.5
chr18: 13645345-13645495RN7SL362P29.31
chr9: 138172245-138172395RP11-399H11.231.55
chr9: 117177065-117177215RP11-9M16.232.53
chrX: 11785145-11785295MSL335.02
chr8: 19982065-19982215ATP6V1B236.26
chr17: 18170165-18170315TOP3A37.61
chr17: 18170165-18170315ALKBH537.61
chr15: 90571485-90571635IDH239.55
chr22: 39016025-39016175GTPBP140.77
View top connections.

Other

CodePlot