SOM cluster: 175

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 266
Promoter: 4%
CpG-Island: 0%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 50/100 | e-val: 0
Factore-val(match)DB
SPI10.00000051916JASPAR
SPIB0.0000054522JASPAR
IRF10.0000095673JASPAR
IRF20.00042999JASPAR
FEV0.00073578JASPAR

BED file downloads

Download top of 266 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 150635540-150635690GM2A44.01
chr5: 150635540-150635690SLC36A244.01
chr9: 132663120-132663270FNBP152.69
chr9: 132663120-132663270TOR1B52.69
chr12: 11989625-11989775ETV654.21
chr1: 207587980-207588130CR254.53
chr1: 207587980-207588130CR154.53
chr20: 44740060-44740210CDH2255.99
chr20: 44740060-44740210SLC12A555.99
chr12: 105035760-105035910CHST1156.58
View top connections.

Other

CodePlot