SOM cluster: 1737

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 4075
Promoter: 2%
CpG-Island: 0%
Conserved: 20%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 2.8e-27
Factore-val(match)DB
Foxq10.0000000048044JASPAR
Foxa20.000000039618JASPAR
Foxd30.00000014668JASPAR
FOXA10.0000001993JASPAR
FOXI10.0000021394JASPAR
Sites: 47/100 | e-val: 0.000081
Factore-val(match)DB
MEF2A0.00017455JASPAR
Pou5f10.00071256JASPAR
Sox20.0057621JASPAR
Lhx30.006683JASPAR
Prrx20.010337JASPAR

BED file downloads

Download top of 4075 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92003360-92003510HSP90B3P5.05
chr11: 15727500-15727650RP11-396O20.238.76
chr8: 49438660-49438810RP11-770E5.141.49
chr3: 23762540-23762690UBE2E141.52
chr4: 190870060-190870210RP11-463J17.143.35
chr7: 98607320-98607470AC004893.1048.02
chr15: 81225320-81225470MESDC249.66
chr5: 148240280-148240430SH3TC251.76
chr2: 202671400-202671550CDK1551.88
chr15: 101564205-101564355RP11-424I19.152.18
View top connections.

Other

CodePlot