SOM cluster: 1719

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1249
Promoter: 1%
CpG-Island: 0%
Conserved: 30%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 0.00000012
Factore-val(match)DB
TEAD10.0010609JASPAR
Lhx30.001154JASPAR
HNF1A0.011238JASPAR
Foxa20.011633JASPAR
FOXO30.013173JASPAR

BED file downloads

Download top of 1249 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 77566740-77566890ST6GALNAC549.01
chr3: 38894640-38894790RP11-134J21.150.25
chr8: 41127120-41127270CTD-3080F16.350.75
chr8: 41127120-41127270SFRP150.75
chr5: 143585720-143585870KCTD1659.15
chr4: 41402440-41402590LIMCH159.57
chr3: 38209780-38209930OXSR160.41
chr1: 55369940-55370090TMEM6160.95
chr8: 38806680-38806830HTRA461.3
chr7: 106903420-106903570HBP161.76
View top connections.

Other

CodePlot