SOM cluster: 1708
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 234Promoter: 1%
CpG-Island: 0%
Conserved: 30%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 43/100 | e-val: 0.0000000001 | ||
---|---|---|
Factor | e-val(match) | DB |
AP1 | 0.00000021489 | JASPAR |
Lhx3 | 0.000019744 | JASPAR |
HNF1A | 0.000063346 | JASPAR |
NFE2L2 | 0.00015292 | JASPAR |
NKX3-1 | 0.0024477 | JASPAR |
Sites: 41/100 | e-val: 1.2 | ||
Factor | e-val(match) | DB |
Foxq1 | 0.00030477 | JASPAR |
HNF1B | 0.00062784 | JASPAR |
Foxd3 | 0.0010306 | JASPAR |
NKX3-1 | 0.0015815 | JASPAR |
HNF1A | 0.010585 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr12: 27925680-27925830 | Y_RNA | 44.63 |
chr12: 27925680-27925830 | RP11-1060J15.4 | 44.63 |
chr8: 38896220-38896370 | SNORD38 | 48.53 |
chr5: 148940925-148941075 | CSNK1A1 | 49.63 |
chr5: 148940925-148941075 | CTB-89H12.4 | 49.63 |
chr3: 57695380-57695530 | DENND6A | 53.54 |
chr8: 87114920-87115070 | PSKH2 | 61.02 |
chr7: 43626080-43626230 | HECW1 | 61.24 |
chr7: 43626080-43626230 | STK17A | 61.24 |
chr1: 214650180-214650330 | PTPN14 | 64.43 |