SOM cluster: 1682

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 309
Promoter: 2%
CpG-Island: 0%
Conserved: 23%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 0.0000000011
Factore-val(match)DB
HNF1A0.0000068816JASPAR
CEBPA0.000088306JASPAR
Lhx30.00011973JASPAR
Prrx20.00012581JASPAR
NFIL30.00029245JASPAR
Sites: 31/100 | e-val: 0.0094
Factore-val(match)DB
Sox20.0011671JASPAR
Foxd30.0013506JASPAR
Lhx30.0021522JASPAR
NFATC20.0027762JASPAR
MEF2A0.0036368JASPAR

BED file downloads

Download top of 309 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 19521700-19521850RP11-1105O14.139.23
chr19: 52589860-52590010ZNF43240.41
chr19: 52589860-52590010ZNF84140.41
chrX: 16661480-16661630CTPS254.44
chr2: 97580200-97580350ANKRD3955.23
chr2: 97580200-97580350CNNM355.23
chr12: 86223300-86223450RASSF956.88
chr1: 13977920-13978070PDPN61.08
chr1: 167532060-167532210CREG163.84
chr8: 127869600-127869750PCAT165.69
View top connections.

Other

CodePlot