SOM cluster: 1650

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 437
Promoter: 1%
CpG-Island: 0%
Conserved: 57%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 50/100 | e-val: 1.3e-18
Factore-val(match)DB
Foxd30.000021941JASPAR
Foxa20.000073444JASPAR
FOXA10.00031179JASPAR
FOXO30.0023417JASPAR
Foxq10.0032682JASPAR

BED file downloads

Download top of 437 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92202220-92202370TGFBR313.27
chr3: 170520105-170520255RPL22L147.49
chr9: 137493740-137493890COL5A150.56
chr7: 28109865-28110015JAZF153.17
chr17: 15955900-15956050ZSWIM756.97
chr17: 15955900-15956050TTC1956.97
chr8: 53030100-53030250RP11-546K22.159.54
chr7: 102567000-102567150FBXL1362.39
chr3: 69974780-69974930MITF64.32
chr6: 133916460-133916610RP3-323P13.264.86
View top connections.

Other

CodePlot