SOM cluster: 165

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 128
Promoter: 0%
CpG-Island: 1%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.0000000088
Factore-val(match)DB
FEV0.0000000023267JASPAR
SPI10.0000092044JASPAR
ELF50.000015329JASPAR
RELA0.00069221JASPAR
GABPA0.00076821JASPAR
Sites: 25/100 | e-val: 2.1
Factore-val(match)DB
FOXI10.000093633JASPAR
Foxd30.00022204JASPAR
RREB10.005381JASPAR
FOXA10.0056694JASPAR
Foxq10.010596JASPAR

BED file downloads

Download top of 128 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 154764465-154764615KCNN360.22
chr13: 43122800-43122950TNFSF1160.97
chr7: 107852260-107852410NRCAM61.78
chr16: 81872520-81872670PLCG261.98
chr15: 90802840-90802990NGRN63.62
chr15: 90802840-90802990RP11-697E2.763.62
chr15: 93168845-93168995FAM174B68.66
chr2: 161993260-161993410TANK72.45
chr1: 206783120-206783270EIF2D78.47
chr4: 160127720-160127870RAPGEF279.47
View top connections.

Other

CodePlot