SOM cluster: 1649

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2664
Promoter: 0%
CpG-Island: 0%
Conserved: 50%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 1.7e-22
Factore-val(match)DB
Foxq10.0000011401JASPAR
Foxd30.0000024116JASPAR
FOXO30.00036684JASPAR
MEF2A0.0013237JASPAR
HNF1A0.0019882JASPAR
Sites: 47/100 | e-val: 0.000000017
Factore-val(match)DB
Prrx20.00052485JASPAR
MEF2A0.0077716JASPAR
Pdx10.0079661JASPAR
NKX3-10.011196JASPAR
Nkx2-50.011734JASPAR

BED file downloads

Download top of 2664 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92646280-92646430GAPDHP4613.76
chr4: 87798580-87798730AFF130.7
chr12: 117094280-117094430RP11-497G19.134.02
chr9: 110583600-110583750RN7SL659P37.22
chr2: 1566540-1566690AC144450.242.68
chr2: 30907500-30907650CAPN1352.69
chr8: 121042100-121042250COL14A153.23
chr8: 71528060-71528210TRAM156.3
chr8: 99356320-99356470KCNS256.36
chr4: 144191520-144191670USP3858.94
View top connections.

Other

CodePlot