SOM cluster: 1646

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1139
Promoter: 0%
CpG-Island: 0%
Conserved: 55%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/100 | e-val: 1.1e-19
Factore-val(match)DB
Lhx30.00043464JASPAR
ARID3A0.00055578JASPAR
MEF2A0.00065327JASPAR
Foxd30.0023143JASPAR
Prrx20.0034191JASPAR
Sites: 43/100 | e-val: 0.000000017
Factore-val(match)DB
HNF1A0.0011444JASPAR
Lhx30.0035843JASPAR
HNF1B0.0054919JASPAR
Pax40.007457JASPAR
Nkx2-50.0085866JASPAR

BED file downloads

Download top of 1139 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 8598740-8598890CLDN2328.64
chr8: 8598740-8598890AC087269.128.64
chr3: 9997300-9997450CIDEC41.32
chr12: 104676145-104676295TXNRD144.96
chr1: 170172940-170173090METTL11B48.56
chr9: 34282260-34282410KIF2451.73
chr3: 177391605-177391755RP11-114M1.155.66
chr8: 120991200-120991350DEPTOR58.45
chr12: 22382960-22383110ST8SIA158.6
chr1: 92366900-92367050TGFBR358.79
View top connections.

Other

CodePlot