SOM cluster: 1646
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 1139Promoter: 0%
CpG-Island: 0%
Conserved: 55%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 71/100 | e-val: 1.1e-19 | ||
---|---|---|
Factor | e-val(match) | DB |
Lhx3 | 0.00043464 | JASPAR |
ARID3A | 0.00055578 | JASPAR |
MEF2A | 0.00065327 | JASPAR |
Foxd3 | 0.0023143 | JASPAR |
Prrx2 | 0.0034191 | JASPAR |
Sites: 43/100 | e-val: 0.000000017 | ||
Factor | e-val(match) | DB |
HNF1A | 0.0011444 | JASPAR |
Lhx3 | 0.0035843 | JASPAR |
HNF1B | 0.0054919 | JASPAR |
Pax4 | 0.007457 | JASPAR |
Nkx2-5 | 0.0085866 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr8: 8598740-8598890 | CLDN23 | 28.64 |
chr8: 8598740-8598890 | AC087269.1 | 28.64 |
chr3: 9997300-9997450 | CIDEC | 41.32 |
chr12: 104676145-104676295 | TXNRD1 | 44.96 |
chr1: 170172940-170173090 | METTL11B | 48.56 |
chr9: 34282260-34282410 | KIF24 | 51.73 |
chr3: 177391605-177391755 | RP11-114M1.1 | 55.66 |
chr8: 120991200-120991350 | DEPTOR | 58.45 |
chr12: 22382960-22383110 | ST8SIA1 | 58.6 |
chr1: 92366900-92367050 | TGFBR3 | 58.79 |