SOM cluster: 1645

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 239
Promoter: 2%
CpG-Island: 0%
Conserved: 55%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 48/100 | e-val: 0.000000000023
Factore-val(match)DB
NR3C10.00000000018086JASPAR
Ar0.00000084293JASPAR
SOX100.0039891JASPAR
FOXO30.0093089JASPAR
Sox50.010776JASPAR
Sites: 25/100 | e-val: 0.0000038
Factore-val(match)DB
NFATC20.00023984JASPAR
Foxd30.0016591JASPAR
IRF10.0018414JASPAR
FOXF20.0024391JASPAR
Foxq10.0060818JASPAR

BED file downloads

Download top of 239 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145485560-145485710RP11-315I20.313.15
chr7: 38487840-38487990AMPH48.21
chr5: 73584500-73584650RN7SL814P48.6
chr5: 73584500-73584650CTD-2275D24.248.6
chr11: 35929505-35929655KRT18P1457.36
chr14: 29011360-29011510EIF4A1P1272.11
chr17: 76393280-76393430SNORA3072.69
chr17: 76393280-76393430PGS172.69
chr7: 107932600-107932750NRCAM77.32
chr11: 114108380-114108530ZBTB1679.68
View top connections.

Other

CodePlot