SOM cluster: 1644

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 220
Promoter: 3%
CpG-Island: 0%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 57/100 | e-val: 3.1e-24
Factore-val(match)DB
Foxd30.000062681JASPAR
Lhx30.0007868JASPAR
NKX3-10.0011901JASPAR
Pou5f10.002161JASPAR
FOXA10.0025879JASPAR
Sites: 23/100 | e-val: 0.51
Factore-val(match)DB
NKX3-10.0042563JASPAR
FOXO30.0046841JASPAR
NR3C10.0071942JASPAR
Foxd30.0089932JASPAR
NFATC20.011081JASPAR
Sites: 25/100 | e-val: 0.53
Factore-val(match)DB
HOXA50.00041507JASPAR
HNF1A0.000937JASPAR
ARID3A0.0046777JASPAR
NF-kappaB0.0054201JASPAR
Lhx30.006531JASPAR

BED file downloads

Download top of 220 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 132325060-132325210NPHP337.56
chr3: 132325060-132325210ACAD1137.56
chr12: 105650960-105651110C12orf7552.91
chr12: 105650960-105651110APPL252.91
chr13: 20413065-20413215PSPC153.28
chr6: 132182640-132182790RP11-69I8.353.9
chr13: 99106545-99106695STK2457.14
chr13: 99106545-99106695FARP157.14
chr8: 108414420-108414570ANGPT158.18
chr1: 178061240-178061390RASAL2-AS160.78
View top connections.

Other

CodePlot