SOM cluster: 162

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 222
Promoter: 3%
CpG-Island: 1%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.00041
Factore-val(match)DB
EWSR1-FLI10.000000011432JASPAR
SP10.000013758JASPAR
PPARG::RXRA0.00020896JASPAR
Pax40.0019612JASPAR
znf1430.0062491JASPAR
Sites: 29/100 | e-val: 0.016
Factore-val(match)DB
FOXA10.0046427JASPAR
IRF10.010118JASPAR
IRF20.010348JASPAR
Spz10.020129JASPAR
Tal1::Gata10.025731JASPAR

BED file downloads

Download top of 222 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr4: 145570880-145571030HHIP52.33
chr4: 41759940-41760090LIMCH153.37
chr12: 7847640-7847790RP11-444J21.257.41
chr16: 53580980-53581130RBL259.06
chr9: 27109080-27109230TEK59.08
chrX: 50557220-50557370BMP1561.83
chr16: 70669205-70669355IL3465.37
chr16: 70669205-70669355VAC1465.37
chr14: 21175045-21175195RNASE168.64
chr5: 34864220-34864370RAD171.04
View top connections.

Other

CodePlot