SOM cluster: 1610

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 228
Promoter: 0%
CpG-Island: 0%
Conserved: 24%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 28/100 | e-val: 0.21
Factore-val(match)DB
Foxd30.0000000018318JASPAR
Foxq10.000000013831JASPAR
FOXI10.000017928JASPAR
FOXA10.000076043JASPAR
Foxa20.00015767JASPAR
Sites: 28/100 | e-val: 0.047
Factore-val(match)DB
AP10.000000000043367JASPAR
NFE2L20.0000000043123JASPAR
PPARG0.0040545JASPAR
NFE2L1::MafG0.0047882JASPAR
Foxa20.018617JASPAR

BED file downloads

Download top of 228 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 16963680-16963830MICU348.48
chr8: 16963680-16963830RP11-468H14.248.48
chr5: 266560-266710AHRR51.4
chr11: 122542420-122542570UBASH3B51.85
chr2: 74227460-74227610ACTG253.25
chr12: 72667080-72667230TRHDE-AS153.48
chr12: 72667080-72667230TRHDE53.48
chr5: 132157700-132157850GDF959.19
chr5: 132157700-132157850CCNI259.19
chr1: 26036540-26036690MAN1C160.08
View top connections.

Other

CodePlot