SOM cluster: 1601

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 343
Promoter: 3%
CpG-Island: 0%
Conserved: 54%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 0.00000000038
Factore-val(match)DB
Foxd30.0026178JASPAR
Foxq10.0029141JASPAR
HNF1A0.0034879JASPAR
ARID3A0.0040922JASPAR
NKX3-10.005341JASPAR

BED file downloads

Download top of 343 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 156565680-156565830LINC0088633.95
chr8: 124281265-124281415ZHX139.7
chr8: 40072140-40072290CTA-392C11.143.87
chr8: 38215880-38216030RP11-350N15.353.97
chr12: 77081900-77082050ZDHHC1754.5
chr8: 110637280-110637430SYBU55.45
chr7: 114054800-114054950AC073626.258.44
chr7: 114054800-114054950FOXP258.44
chr8: 12652700-12652850OR7E15P59.99
chr4: 151515280-151515430MAB21L262.1
View top connections.

Other

CodePlot