SOM cluster: 1599

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 689
Promoter: 0%
CpG-Island: 0%
Conserved: 57%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 0.00000000001
Factore-val(match)DB
Lhx30.0000063585JASPAR
ARID3A0.00059468JASPAR
Foxd30.00086355JASPAR
HNF1A0.0021225JASPAR
HNF1B0.0030752JASPAR

BED file downloads

Download top of 689 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145657080-145657230ANKRD3521.83
chr1: 59763980-59764130FGGY36.08
chr5: 130993500-130993650FNIP153.05
chr3: 73374080-73374230PDZRN353.6
chr5: 102000080-102000230PAM55.06
chr8: 121340780-121340930COL14A156.31
chr1: 215219340-215219490KCNK257.05
chr17: 54347240-54347390ANKFN158.68
chr6: 127498600-127498750RSPO359.69
chr4: 148734720-148734870ARHGAP1064.75
View top connections.

Other

CodePlot