SOM cluster: 1594

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 177
Promoter: 0%
CpG-Island: 0%
Conserved: 47%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 46/100 | e-val: 0.00000036
Factore-val(match)DB
HNF1B0.00055076JASPAR
Foxd30.0017008JASPAR
Foxq10.0045176JASPAR
Lhx30.011273JASPAR
MEF2A0.016794JASPAR
Sites: 25/100 | e-val: 0.000083
Factore-val(match)DB
HNF1B0.0013504JASPAR
NFE2L20.0015845JASPAR
HNF1A0.0016453JASPAR
NFIL30.0038134JASPAR
Lhx30.0040944JASPAR

BED file downloads

Download top of 177 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150853920-150854070CYCSP5113.22
chr1: 150853920-150854070SETDB113.22
chr1: 150853920-150854070CTSK13.22
chr1: 150853920-150854070ARNT13.22
chr7: 107254980-107255130DUS4L29.25
chr6: 31484420-31484570DDX39B51.86
chr6: 31484420-31484570ATP6V1G2-DDX39B51.86
chr3: 151940260-151940410MBNL1-AS154.89
chr1: 172872360-172872510RP1-15D23.256.39
chr8: 130285900-130286050LINC0097756.96
View top connections.

Other

CodePlot