SOM cluster: 1538

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 236
Promoter: 1%
CpG-Island: 0%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 40/100 | e-val: 1.8e-33
Factore-val(match)DB
NR3C10.0000000000000096589JASPAR
Ar0.0000000198JASPAR
Sox50.0043342JASPAR
SOX100.0045931JASPAR
RXRA::VDR0.014679JASPAR

BED file downloads

Download top of 236 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 86000380-86000530RP11-131L23.143.18
chr10: 91262420-91262570LIPA52.68
chr10: 91262420-91262570IFIT552.68
chr10: 91262420-91262570SLC16A1252.68
chr17: 61112760-61112910TANC254.05
chr3: 12185580-12185730TIMP460.42
chr4: 74872060-74872210PF460.97
chr4: 74872060-74872210CXCL360.97
chr4: 74872060-74872210CXCL560.97
chr11: 26621100-26621250SLC5A1263.31
View top connections.

Other

CodePlot