SOM cluster: 1524

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1354
Promoter: 22%
CpG-Island: 61%
Conserved: 62%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 0
Factore-val(match)DB
SP10.00000098113JASPAR
TFAP2A0.0043187JASPAR
RXR::RAR_DR50.009016JASPAR
Klf40.012995JASPAR
PPARG::RXRA0.019038JASPAR
Sites: 38/100 | e-val: 0.0031
Factore-val(match)DB
SP10.0001268JASPAR
TFAP2A0.0026498JASPAR
Klf40.0065399JASPAR
REST0.0067572JASPAR
Egr10.0079247JASPAR
Sites: 37/100 | e-val: 0.000000016
Factore-val(match)DB
EWSR1-FLI10.000000027982JASPAR
SP10.00000057698JASPAR
PLAG10.00034454JASPAR
Pax40.0024893JASPAR
SPI10.0037111JASPAR

BED file downloads

Download top of 1354 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 148864485-148864635RP11-14N7.213.97
chr7: 117512745-117512895CTTNBP238.52
chrX: 100333740-100333890TMEM3542.63
chr8: 91996920-91997070C8orf8847.52
chr4: 101111100-101111250DDIT4L48.43
chr2: 75427920-75428070TACR148.62
chr10: 13933600-13933750FRMD4A48.63
chr4: 174449720-174449870HAND2-AS148.88
chr7: 32110205-32110355PDE1C49.48
chr11: 66084725-66084875TMEM151A49.5
View top connections.

Other

CodePlot