SOM cluster: 1510

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 160
Promoter: 2%
CpG-Island: 0%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 3.7e-19
Factore-val(match)DB
FOXA10.004371JASPAR
FOXO30.0076702JASPAR
Pou5f10.0080638JASPAR
Foxa20.01003JASPAR
TEAD10.012392JASPAR
Sites: 47/100 | e-val: 0.000055
Factore-val(match)DB
NFATC20.0000091588JASPAR
NFE2L20.000062366JASPAR
HNF1A0.0007079JASPAR
AP10.00097418JASPAR
Lhx30.0020645JASPAR

BED file downloads

Download top of 160 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr4: 95393360-95393510PDLIM542.69
chr1: 219362460-219362610RP11-135J2.447.62
chr1: 219362460-219362610RP11-135J2.347.62
chr1: 59594520-59594670RP11-470E16.150.27
chr2: 111829560-111829710ACOXL53.05
chr4: 158037220-158037370GRIA256.89
chr9: 18658880-18659030ADAMTSL158.4
chr4: 159696560-159696710PPID59.85
chr4: 159696560-159696710FNIP259.85
chr7: 107580240-107580390U360.33
View top connections.

Other

CodePlot