SOM cluster: 1403

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 417
Promoter: 1%
CpG-Island: 0%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 21/100 | e-val: 0.0000012
Factore-val(match)DB
TLX1::NFIC0.000000000055646JASPAR
E2F10.0025538JASPAR
INSM10.0027872JASPAR
NFIC0.0029906JASPAR
HNF4A0.0052806JASPAR

BED file downloads

Download top of 417 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 27969185-27969335ANKRD13B50.54
chr17: 27969185-27969335GIT150.54
chr19: 45353900-45354050APOE56.13
chr4: 41439340-41439490LIMCH156.31
chr4: 41439340-41439490RP11-124A7.156.31
chr3: 129528280-129528430AC083799.156.4
chr3: 129528280-129528430TMCC156.4
chr22: 38368680-38368830SOX1058.15
chr12: 79346060-79346210SYT158.3
chr3: 170281740-170281890SLC7A1459.89
View top connections.

Other

CodePlot