SOM cluster: 1399

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 152
Promoter: 1%
CpG-Island: 0%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 0.000000000000085
Factore-val(match)DB
TAL1::TCF30.00000039052JASPAR
Myf0.00073177JASPAR
NHLH10.00097339JASPAR
FOXO30.0030966JASPAR
FOXD10.0036593JASPAR
Sites: 19/100 | e-val: 0.00013
Factore-val(match)DB
Sox20.00004309JASPAR
Pou5f10.0019208JASPAR
NFE2L20.0027473JASPAR
Foxd30.013257JASPAR
Prrx20.021245JASPAR

BED file downloads

Download top of 152 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 109983820-109983970SYPL251.11
chr4: 156659780-156659930GUCY1B362.94
chr2: 238406560-238406710RAB1764.48
chr2: 238406560-238406710COL6A364.48
chr3: 79464080-79464230ROBO168.61
chr4: 26143680-26143830RBPJ72.39
chr22: 41875280-41875430PMM172.63
chr13: 75980200-75980350TBC1D4-AS174.26
chr4: 88419740-88419890SPARCL174.96
chr4: 156881800-156881950CTSO76.25
View top connections.

Other

CodePlot