SOM cluster: 1364

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 146
Promoter: 7%
CpG-Island: 5%
Conserved: 33%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 35/100 | e-val: 0.0019
Factore-val(match)DB
SP10.00000076205JASPAR
MZF1_5-130.0017862JASPAR
EWSR1-FLI10.0024217JASPAR
Pax40.0026671JASPAR
RXR::RAR_DR50.0069682JASPAR
Sites: 19/100 | e-val: 0.23
Factore-val(match)DB
AP10.000000022546JASPAR
NFE2L20.0000069394JASPAR
NFE2L1::MafG0.00061084JASPAR
T0.00064161JASPAR
PPARG0.0026077JASPAR

BED file downloads

Download top of 146 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 156634340-156634490RRNAD157.08
chr1: 156634340-156634490NES57.08
chr13: 38444560-38444710TRPC461.77
chr3: 156468820-156468970LINC0088663.8
chr11: 126870625-126870775KIRREL363.81
chr11: 126870625-126870775RP11-688I9.463.81
chr11: 126870625-126870775RP11-688I9.263.81
chr11: 131449825-131449975NTM64.14
chr1: 115632740-115632890TSPAN267.46
chr1: 103572640-103572790COL11A172.82
View top connections.

Other

CodePlot