SOM cluster: 1357

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 368
Promoter: 39%
CpG-Island: 88%
Conserved: 69%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 0
Factore-val(match)DB
SP10.00000011965JASPAR
TFAP2A0.00051058JASPAR
Egr10.00051178JASPAR
Klf40.00090462JASPAR
RREB10.019961JASPAR
Sites: 66/100 | e-val: 5.1e-31
Factore-val(match)DB
SP10.0000024659JASPAR
TFAP2A0.00014173JASPAR
PLAG10.00036391JASPAR
Klf40.0050183JASPAR
RXR::RAR_DR50.027286JASPAR
Sites: 41/100 | e-val: 0.66
Factore-val(match)DB
SP10.0000022104JASPAR
PLAG10.00018978JASPAR
TFAP2A0.0007642JASPAR
Klf40.0013275JASPAR
CTCF0.0059909JASPAR

BED file downloads

Download top of 368 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 184054080-184054230RP11-433C9.254.95
chr7: 150101940-150102090GIMAP855.87
chr22: 38808885-38809035KDELR357.29
chr3: 154041940-154042090GPR14958.31
chr10: 82215005-82215155FAM213A58.98
chr8: 22462625-22462775BIN360.62
chr1: 896645-896795RP11-54O7.361.83
chr1: 896645-896795AGRN61.83
chr5: 1386625-1386775TERT62.2
chr16: 50776220-50776370CYLD64.04
View top connections.

Other

CodePlot