SOM cluster: 1356

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 435
Promoter: 27%
CpG-Island: 97%
Conserved: 82%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 0
Factore-val(match)DB
SP10.000014714JASPAR
TFAP2A0.00005804JASPAR
Zfx0.0020162JASPAR
PLAG10.0073416JASPAR
NHLH10.027567JASPAR
Sites: 82/100 | e-val: 6.7963e-43
Factore-val(match)DB
SP10.001469JASPAR
TFAP2A0.0017162JASPAR
PLAG10.0075583JASPAR
Zfx0.067187JASPAR
Egr10.11619JASPAR
Sites: 58/100 | e-val: 0.0000000046
Factore-val(match)DB
NHLH10.000095234JASPAR
TFAP2A0.00038508JASPAR
Myf0.0029168JASPAR
SP10.0084154JASPAR
PLAG10.011048JASPAR

BED file downloads

Download top of 435 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 13153465-13153615RP11-377D9.338.79
chr1: 168195365-168195515ANKRD36BP142.35
chr20: 32951460-32951610AHCY45.34
chr20: 32951460-32951610ITCH-IT145.34
chr6: 119670605-119670755MAN1A145.9
chr7: 33148840-33148990BBS948.98
chr7: 33148840-33148990AC074338.548.98
chr1: 166845060-166845210TADA153.42
chr12: 89747540-89747690DUSP656.35
chr3: 39425460-39425610CCR856.89
View top connections.

Other

CodePlot