SOM cluster: 1346

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 153
Promoter: 1%
CpG-Island: 0%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 86/100 | e-val: 7.4e-28
Factore-val(match)DB
Foxd30.00011357JASPAR
Foxq10.00020794JASPAR
Pax40.0014694JASPAR
HNF1B0.0021132JASPAR
MEF2A0.0054931JASPAR
Sites: 37/100 | e-val: 0.000000015
Factore-val(match)DB
AP10.00000000028017JASPAR
NFE2L20.0000032033JASPAR
PPARG0.0091986JASPAR
NFE2L1::MafG0.026863JASPAR
PBX10.044274JASPAR

BED file downloads

Download top of 153 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 32010245-32010395OSBPL1038.74
chr3: 37204700-37204850LRRFIP243.59
chr3: 37204700-37204850UBE2FP143.59
chr1: 172872160-172872310RP1-15D23.250.03
chr8: 36759145-36759295AC090453.150.4
chr1: 162660500-162660650RN7SL861P50.65
chr1: 162660500-162660650DDR250.65
chr1: 184857800-184857950FAM129A70.3
chr4: 26524220-26524370TBC1D1971.17
chr15: 74471685-74471835STRA675.87
View top connections.

Other

CodePlot