SOM cluster: 134
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 176Promoter: 35%
CpG-Island: 63%
Conserved: 74%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 98/100 | e-val: 0 | ||
---|---|---|
Factor | e-val(match) | DB |
SP1 | 0.00000011442 | JASPAR |
TFAP2A | 0.0000041543 | JASPAR |
INSM1 | 0.00059102 | JASPAR |
PLAG1 | 0.012272 | JASPAR |
PPARG::RXRA | 0.01655 | JASPAR |
Sites: 74/100 | e-val: 0.41 | ||
Factor | e-val(match) | DB |
TFAP2A | 0.000028028 | JASPAR |
SP1 | 0.00014945 | JASPAR |
PLAG1 | 0.0036852 | JASPAR |
Klf4 | 0.025808 | JASPAR |
PPARG::RXRA | 0.034095 | JASPAR |
Sites: 19/100 | e-val: 0.00000019 | ||
Factor | e-val(match) | DB |
SP1 | 0.0000000010679 | JASPAR |
Klf4 | 0.000000019138 | JASPAR |
Zfx | 0.00060493 | JASPAR |
TFAP2A | 0.0070382 | JASPAR |
Pax5 | 0.0076805 | JASPAR |
Sites: 23/100 | e-val: 0.0082 | ||
Factor | e-val(match) | DB |
CTCF | 0.0000000000063762 | JASPAR |
INSM1 | 0.0000026924 | JASPAR |
SP1 | 0.000044268 | JASPAR |
PLAG1 | 0.0001397 | JASPAR |
Zfp423 | 0.0014897 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr9: 103361060-103361210 | MSANTD3-TMEFF1 | 38.5 |
chr17: 29024980-29025130 | SMURF2P1 | 48.91 |
chr1: 151043400-151043550 | BNIPL | 48.99 |
chr1: 151043400-151043550 | SCNM1 | 48.99 |
chr17: 58603240-58603390 | PPM1D | 53.08 |
chr5: 149838480-149838630 | NDST1 | 60.24 |
chr5: 149838480-149838630 | TCOF1 | 60.24 |
chr5: 149838480-149838630 | RPS14 | 60.24 |
chr10: 121249380-121249530 | RGS10 | 66.8 |
chr10: 121249380-121249530 | TIAL1 | 66.8 |