SOM cluster: 1326

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1194
Promoter: 8%
CpG-Island: 12%
Conserved: 24%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 26/100 | e-val: 0.000000081
Factore-val(match)DB
RREB10.00060298JASPAR
SP10.002731JASPAR
TEAD10.0068561JASPAR
TFAP2A0.0099334JASPAR
Myb0.016116JASPAR
Sites: 25/100 | e-val: 0.42
Factore-val(match)DB
SP10.0000051174JASPAR
RREB10.0000093659JASPAR
Klf40.00060932JASPAR
Pax40.0041179JASPAR
PLAG10.0079885JASPAR

BED file downloads

Download top of 1194 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr18: 47641680-47641830MYO5B38.69
chr10: 120784440-120784590RP11-498J9.246.1
chr1: 151153220-151153370SCNM148.64
chr1: 152921460-152921610SPRR349.74
chr1: 1183645-1183795MIR200A51.67
chr1: 1183645-1183795UBE2J251.67
chr19: 457645-457795TPGS153.97
chr11: 2041665-2041815AC051649.654.66
chr16: 3140145-3140295ZNF20555.61
chr17: 81049885-81050035B3GNTL155.84
View top connections.

Other

CodePlot