SOM cluster: 1283

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 330
Promoter: 1%
CpG-Island: 0%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 2.6
Factore-val(match)DB
HNF1B0.00034899JASPAR
Prrx20.0025516JASPAR
Lhx30.0036083JASPAR
HNF1A0.010855JASPAR
HOXA50.017108JASPAR
Sites: 24/100 | e-val: 0.00047
Factore-val(match)DB
RELA0.000018594JASPAR
TEAD10.000058518JASPAR
NF-kappaB0.00037522JASPAR
SPI10.00057563JASPAR
REL0.0022484JASPAR

BED file downloads

Download top of 330 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 117531040-117531190PTGFRN58.18
chr11: 122214020-122214170RP11-716H6.158.34
chr11: 122214020-122214170RP11-820L6.158.34
chr7: 124633340-124633490EEF1GP163.7
chr7: 124633340-124633490POT1-AS163.7
chr1: 78475660-78475810NEXN63.94
chr2: 207450240-207450390ADAM2364.04
chr12: 63086620-63086770MON270.74
chr12: 63086620-63086770MIRLET7I70.74
chr22: 33236200-33236350TIMP370.82
View top connections.

Other

CodePlot