SOM cluster: 1269

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 355
Promoter: 49%
CpG-Island: 61%
Conserved: 51%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 0.0000044
Factore-val(match)DB
SP10.00000010048JASPAR
Klf40.00027886JASPAR
Tcfcp2l10.0063623JASPAR
EWSR1-FLI10.0092908JASPAR
Pax40.012226JASPAR

BED file downloads

Download top of 355 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149223300-149223450RP11-403I13.824.97
chr9: 108457240-108457390FKTN37.6
chr9: 108457240-108457390RP11-18B3.237.6
chr9: 108457240-108457390TMEM38B37.6
chr3: 38537960-38538110RPL18AP739.19
chr1: 202311280-202311430UBE2T39.83
chr3: 148804020-148804170HLTF-AS140.54
chr5: 98264980-98265130CHD142.07
chr1: 149858520-149858670MTMR1144.47
chr1: 149858520-149858670SF3B444.47
View top connections.

Other

CodePlot