SOM cluster: 1260

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 400
Promoter: 26%
CpG-Island: 98%
Conserved: 76%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 100/100 | e-val: 0
Factore-val(match)DB
SP10.000035552JASPAR
TFAP2A0.00020945JASPAR
PLAG10.0016293JASPAR
Egr10.0077433JASPAR
Klf40.057189JASPAR
Sites: 96/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.00011409JASPAR
SP10.00035444JASPAR
Egr10.01217JASPAR
PLAG10.049512JASPAR
Zfx0.063209JASPAR
Sites: 66/100 | e-val: 0.00058
Factore-val(match)DB
SP10.0000020886JASPAR
GABPA0.0040468JASPAR
Myf0.0062456JASPAR
NHLH10.012385JASPAR
TFAP2A0.020107JASPAR

BED file downloads

Download top of 400 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 152954725-152954875SLC6A836.93
chrX: 152954725-152954875SRPK336.93
chrX: 152954725-152954875PLXNB336.93
chrX: 152954725-152954875ABCD136.93
chr1: 204042620-204042770SOX1339.77
chr12: 9217085-9217235RP11-259O18.445.81
chr22: 19749685-19749835TBX151.75
chr7: 130418765-130418915AC016831.356.5
chr12: 48396545-48396695RP1-228P16.156.68
chr12: 48396545-48396695RP1-228P16.456.68
View top connections.

Other

CodePlot