SOM cluster: 1253

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 83
Promoter: 7%
CpG-Island: 4%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 62/83 | e-val: 2.70451e-43
Factore-val(match)DB
TLX1::NFIC0.000000000070421JASPAR
ESR20.0014174JASPAR
ESR10.0049196JASPAR
PPARG0.0089117JASPAR
SP10.056548JASPAR
Sites: 46/83 | e-val: 0.000047
Factore-val(match)DB
SP10.0000057756JASPAR
Klf40.0074392JASPAR
Tal1::Gata10.0086417JASPAR
EWSR1-FLI10.0095229JASPAR
INSM10.012807JASPAR
Sites: 29/83 | e-val: 2.2
Factore-val(match)DB
Zfx0.0000039468JASPAR
TP530.00016349JASPAR
TFAP2A0.00073446JASPAR
Egr10.0011044JASPAR
SP10.0038402JASPAR

BED file downloads

Download top of 83 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 62269120-62269270CTD-2531D15.445.31
chr22: 46926680-46926830CELSR162.13
chr22: 46926680-46926830RP3-439F8.162.13
chr9: 116925940-116926090COL27A165.55
chr1: 2391340-2391490PLCH266.92
chr1: 2391340-2391490RP3-395M20.866.92
chr6: 110736660-110736810DDO68.38
chr17: 38488760-38488910RARA69.84
chr1: 33476940-33477090RP4-803A2.271.66
chr17: 76320485-76320635RN7SL236P72.69
View top connections.

Other

CodePlot