SOM cluster: 1227

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 651
Promoter: 40%
CpG-Island: 15%
Conserved: 28%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.0000061
Factore-val(match)DB
IRF10.0000092506JASPAR
NFATC20.00024713JASPAR
IRF20.003007JASPAR
NFE2L20.0047099JASPAR
Pou5f10.0095349JASPAR
Sites: 18/100 | e-val: 0.45
Factore-val(match)DB
Pax40.000000018278JASPAR
RREB10.0000014447JASPAR
Klf40.0000021889JASPAR
SP10.00024363JASPAR
Ar0.00028926JASPAR

BED file downloads

Download top of 651 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145427765-145427915GNRHR213.82
chr1: 145427765-145427915POLR3GL13.82
chr1: 145427765-145427915RP11-315I20.113.82
chr1: 145427765-145427915RBM8A13.82
chr1: 145427765-145427915RNVU1-613.82
chr1: 151320140-151320290RFX521.23
chr1: 151320140-151320290PSMB421.23
chr1: 151320140-151320290PI4KB21.23
chr1: 151320140-151320290RP11-126K1.821.23
chr1: 151320140-151320290POGZ21.23
View top connections.

Other

CodePlot