SOM cluster: 1219

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 194
Promoter: 5%
CpG-Island: 9%
Conserved: 22%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 58/100 | e-val: 0.000000000000013
Factore-val(match)DB
RREB10.0000002142JASPAR
Pax40.0000014461JASPAR
SP10.0000018439JASPAR
REST0.0038326JASPAR
Tal1::Gata10.0040954JASPAR
Sites: 7/100 | e-val: 0.77
Factore-val(match)DB
ZEB10.00085906JASPAR
T0.001083JASPAR
Myf0.014332JASPAR
FOXO30.014773JASPAR
NR1H2::RXRA0.018047JASPAR
Sites: 16/100 | e-val: 0.0027
Factore-val(match)DB
Myf0.010068JASPAR
EWSR1-FLI10.019171JASPAR
NHLH10.019708JASPAR
Hand1::Tcfe2a0.021464JASPAR
TLX1::NFIC0.031683JASPAR

BED file downloads

Download top of 194 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 1213360-1213510RP11-532E4.258.73
chr19: 1455160-1455310AC005329.769.63
chr19: 1455160-1455310ADAMTSL569.63
chr13: 41241240-41241390FOXO174.49
chr22: 39573805-39573955PDGFB76.4
chr21: 43640200-43640350ABCG179.87
chr8: 58116705-58116855RP11-513O17.189.44
chr1: 1005425-1005575ISG1590.77
chr1: 1005425-1005575MIR200A90.77
chr1: 1005425-1005575RNF22390.77
View top connections.

Other

CodePlot