SOM cluster: 1216

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 287
Promoter: 43%
CpG-Island: 77%
Conserved: 79%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 92/100 | e-val: 0
Factore-val(match)DB
CTCF0.00000037262JASPAR
SP10.0000018338JASPAR
INSM10.00011514JASPAR
Egr10.00069916JASPAR
TFAP2A0.0019401JASPAR
Sites: 86/100 | e-val: 0
Factore-val(match)DB
SP10.000000013316JASPAR
Klf40.00011037JASPAR
TFAP2A0.00020185JASPAR
Zfx0.0032171JASPAR
Pax40.027001JASPAR
Sites: 45/100 | e-val: 0.0000000001
Factore-val(match)DB
SP10.000075199JASPAR
Myf0.0040245JASPAR
PLAG10.02331JASPAR
INSM10.024019JASPAR
TFAP2A0.033452JASPAR
Sites: 35/100 | e-val: 0.11
Factore-val(match)DB
TFAP2A0.0012881JASPAR
SP10.001303JASPAR
INSM10.0028241JASPAR
NHLH10.0070196JASPAR
PLAG10.01267JASPAR

BED file downloads

Download top of 287 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 32280060-32280210CMTM839.85
chr9: 133814585-133814735QRFP43.18
chr5: 176514000-176514150FGFR445.7
chr8: 144490200-144490350RNU6-220P48.61
chr3: 39093860-39094010GORASP148.7
chr1: 45251805-45251955BTBD1950.39
chr1: 45251805-45251955KIF2C50.39
chr1: 45251805-45251955TCTEX1D450.39
chr1: 45251805-45251955RNU5E-6P50.39
chr1: 45251805-45251955RPS850.39
View top connections.

Other

CodePlot