SOM cluster: 1196

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 192
Promoter: 8%
CpG-Island: 0%
Conserved: 55%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 58/100 | e-val: 1.8e-19
Factore-val(match)DB
TEAD10.000000000032574JASPAR
RELA0.00006739JASPAR
NF-kappaB0.00015008JASPAR
NFATC20.00051213JASPAR
REL0.00068961JASPAR
Sites: 22/100 | e-val: 0.00069
Factore-val(match)DB
AP10.000000000025742JASPAR
NFE2L20.0000000068398JASPAR
PPARG0.0025385JASPAR
NFE2L1::MafG0.0047519JASPAR
RORA_20.013255JASPAR

BED file downloads

Download top of 192 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 179133740-179133890ABL240.48
chr1: 179133740-179133890TOR3A40.48
chr17: 64546060-64546210PRKCA44.37
chr7: 107607300-107607450LAMB146.93
chr9: 132945620-132945770NCS149.11
chr9: 132945620-132945770Y_RNA49.11
chr5: 171534800-171534950STK1052.96
chr8: 69672200-69672350RNA5SP26957.97
chr8: 69672200-69672350C8orf3457.97
chr4: 79490480-79490630snoU1358.21
View top connections.

Other

CodePlot