SOM cluster: 1183

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 306
Promoter: 3%
CpG-Island: 0%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/100 | e-val: 0.000000014
Factore-val(match)DB
Foxd30.00077082JASPAR
IRF10.0027391JASPAR
FOXF20.0099588JASPAR
Foxa20.010932JASPAR
Foxq10.01692JASPAR
Sites: 14/100 | e-val: 0.16
Factore-val(match)DB
RUNX10.0015376JASPAR
HOXA50.003089JASPAR
SRF0.0041566JASPAR
RORA_10.0060084JASPAR
NKX3-10.00663JASPAR

BED file downloads

Download top of 306 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 77629980-77630130RP1-34H18.129.96
chr10: 24753985-24754135KIAA121740.24
chr16: 50836020-50836170NOD260.38
chr8: 98929020-98929170MATN265.92
chr11: 33756280-33756430RP11-646J21.566.69
chr11: 33756280-33756430RP11-646J21.266.69
chr11: 76320920-76321070GUCY2EP70.15
chr8: 94859200-94859350PDP170.66
chr19: 14133280-14133430ASF1B72.32
chr19: 14133280-14133430PODNL172.32
View top connections.

Other

CodePlot