SOM cluster: 1158
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 221Promoter: 1%
CpG-Island: 2%
Conserved: 43%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 53/100 | e-val: 1.6e-38 | ||
---|---|---|
Factor | e-val(match) | DB |
REST | 0.0027046 | JASPAR |
TLX1::NFIC | 0.0055193 | JASPAR |
TFAP2A | 0.019374 | JASPAR |
SP1 | 0.026843 | JASPAR |
Tcfcp2l1 | 0.03523 | JASPAR |
Sites: 64/100 | e-val: 0.0000000001 | ||
Factor | e-val(match) | DB |
Myf | 0.000035148 | JASPAR |
NHLH1 | 0.00053911 | JASPAR |
Myb | 0.0072491 | JASPAR |
TLX1::NFIC | 0.019896 | JASPAR |
SPI1 | 0.024695 | JASPAR |
Sites: 22/100 | e-val: 0.000034 | ||
Factor | e-val(match) | DB |
TLX1::NFIC | 0.000054282 | JASPAR |
AP1 | 0.0036604 | JASPAR |
Tcfcp2l1 | 0.006695 | JASPAR |
NFE2L2 | 0.0128 | JASPAR |
NFIC | 0.024615 | JASPAR |
Sites: 17/100 | e-val: 1.5 | ||
Factor | e-val(match) | DB |
REST | 0.00023395 | JASPAR |
INSM1 | 0.0053828 | JASPAR |
ESR1 | 0.0084703 | JASPAR |
Myf | 0.010018 | JASPAR |
Zfp423 | 0.017758 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr16: 85640560-85640710 | GSE1 | 50.55 |
chr3: 140812840-140812990 | RP11-231L11.1 | 60.05 |
chr7: 139376340-139376490 | HIPK2 | 62.32 |
chr22: 46502965-46503115 | PPARA | 64.04 |
chr22: 46502965-46503115 | RP6-109B7.3 | 64.04 |
chr1: 110175380-110175530 | GSTM1 | 70.35 |
chr1: 110175380-110175530 | AMPD2 | 70.35 |
chr3: 8692640-8692790 | LMCD1-AS1 | 70.52 |
chr5: 156876565-156876715 | ADAM19 | 78.72 |
chr5: 156876565-156876715 | NIPAL4 | 78.72 |