SOM cluster: 1086

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 8217
Promoter: 1%
CpG-Island: 0%
Conserved: 23%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 69/100 | e-val: 5.19994e-41
Factore-val(match)DB
MEF2A0.000011789JASPAR
NKX3-10.00041555JASPAR
Foxa20.0017623JASPAR
FOXA10.0072467JASPAR
Foxd30.0081588JASPAR
Sites: 47/100 | e-val: 0.000000000000026
Factore-val(match)DB
NKX3-10.00026227JASPAR
Prrx20.0027405JASPAR
NFATC20.0044646JASPAR
Nkx2-50.017926JASPAR
Lhx30.019348JASPAR

BED file downloads

Download top of 8217 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 21581000-21581150RP11-275N1.121.36
chr5: 147068440-147068590JAKMIP232.91
chr8: 75667220-75667370PI1534.79
chr8: 77589860-77590010ZFHX4-AS137.74
chr8: 77589860-77590010ZFHX437.74
chr8: 8286520-8286670SGK22341.31
chr12: 46795780-46795930RP11-474P2.242.9
chr17: 2060160-2060310SMG647.53
chr17: 2060160-2060310HIC147.53
chr2: 157332960-157333110snoU1348.03
View top connections.

Other

CodePlot