SOM cluster: 103

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 86
Promoter: 15%
CpG-Island: 18%
Conserved: 45%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/86 | e-val: 0.000000092
Factore-val(match)DB
SP10.000045227JASPAR
RREB10.0009364JASPAR
Pax40.0016052JASPAR
Klf40.0026218JASPAR
PLAG10.018166JASPAR
Sites: 14/86 | e-val: 0.093
Factore-val(match)DB
Pou5f10.000000000069375JASPAR
Sox20.00000046549JASPAR
NFATC20.0012828JASPAR
FOXA10.0013933JASPAR
TLX1::NFIC0.0021752JASPAR

BED file downloads

Download top of 86 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 215420-215570IQSEC348.58
chr1: 207627540-207627690CR256.6
chr2: 128587540-128587690POLR2D62.55
chr2: 128587540-128587690AC006011.462.55
chr2: 128587540-128587690WDR3362.55
chr11: 58869860-58870010FAM111B65.91
chr11: 58869860-58870010FAM111A65.91
chr7: 55625420-55625570VOPP168.78
chr7: 55625420-55625570RP11-310H4.168.78
chr9: 132652880-132653030FNBP169.1
View top connections.

Other

CodePlot