SOM cluster: 1025

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1289
Promoter: 28%
CpG-Island: 6%
Conserved: 30%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 1e-16
Factore-val(match)DB
EWSR1-FLI10.000000044184JASPAR
SP10.00000039303JASPAR
SPI10.000070774JASPAR
Pax40.00035031JASPAR
SPIB0.0011631JASPAR
Sites: 58/100 | e-val: 0.000018
Factore-val(match)DB
SP10.00010794JASPAR
INSM10.0019183JASPAR
znf1430.0029203JASPAR
Zfx0.0035697JASPAR
ESR10.0057974JASPAR
Sites: 24/100 | e-val: 2.5
Factore-val(match)DB
RREB10.00000052097JASPAR
Myf0.000034059JASPAR
Klf40.0033561JASPAR
SP10.0095697JASPAR
Egr10.0098932JASPAR

BED file downloads

Download top of 1289 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 6981340-6981490PTPN644.23
chr12: 6981340-6981490CDCA344.23
chr12: 6981340-6981490EMG144.23
chr12: 6981340-6981490TPI144.23
chr12: 6981340-6981490PHB244.23
chr12: 6981340-6981490C12orf5744.23
chr12: 6981340-6981490SCARNA1244.23
chr12: 6981340-6981490LEPREL244.23
chr10: 98479400-98479550RP11-34E5.444.74
chr10: 98479400-98479550PIK3AP144.74
View top connections.

Other

CodePlot