SOM cluster: 1004

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3659
Promoter: 0%
CpG-Island: 0%
Conserved: 59%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/100 | e-val: 2.8e-40
Factore-val(match)DB
Foxd30.00066048JASPAR
Lhx30.00084333JASPAR
MEF2A0.00088763JASPAR
Foxq10.0011823JASPAR
Sox20.0049152JASPAR
Sites: 37/100 | e-val: 0.00000000000032
Factore-val(match)DB
Lhx30.00000062839JASPAR
Prrx20.00096383JASPAR
ARID3A0.0029364JASPAR
Pdx10.006444JASPAR
HNF1A0.012162JASPAR
Sites: 26/100 | e-val: 0.000000000024
Factore-val(match)DB
NFATC20.000044518JASPAR
IRF10.00014015JASPAR
FOXA10.0097699JASPAR
IRF20.012125JASPAR
Foxq10.018493JASPAR

BED file downloads

Download top of 3659 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr13: 102897180-102897330FGF14-IT129.64
chr8: 9035760-9035910RP11-115J16.135.05
chr11: 125923720-125923870CDON36.02
chr9: 134195500-134195650PPAPDC341.03
chr3: 37962640-37962790ITGA945.24
chr12: 109000360-109000510TMEM11948.16
chr6: 40374040-40374190LINC0095149.28
chr6: 40374040-40374190LRFN249.28
chr1: 49354860-49355010AGBL449.55
chr8: 9625920-9626070TNKS50.02
View top connections.

Other

CodePlot